Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 IGHV3-71-201ENST00000523324 359 ntBASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 TMEM261P1-201ENST00000604899 340 ntBASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 AL162274.1-201ENST00000617191 1098 ntBASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CASKIN1Q8WXD9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 GALT-202ENST00000450095 1280 ntTSL 2 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 ACA64.2-201ENST00000459014 129 ntBASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
CASKIN1Q8WXD9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 AL359881.2-201ENST00000602973 570 ntBASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CASKIN1Q8WXD9 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 BNIP3P1-202ENST00000550043 1585 ntBASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 ME2P1-201ENST00000426028 1970 ntBASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 GRN-214ENST00000589265 1632 ntTSL 5 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 TTTY23B-201ENST00000442790 549 ntBASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 MIR8072-201ENST00000614241 80 ntBASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CASKIN1Q8WXD9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 MXI1-205ENST00000393134 889 ntTSL 2 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 TARDBPP1-201ENST00000442013 1203 ntBASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 AC011495.1-201ENST00000498085 584 ntBASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 APOC4-201ENST00000591600 348 ntTSL 3 BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 MIR6752-201ENST00000618442 71 ntBASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CASKIN1Q8WXD9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC25.16■■□□□ 1.62
CASKIN1Q8WXD9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms