Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 REXO1L8P-201ENST00000604378 1897 ntBASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCC2Q8TAQ2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 CEND1P1-201ENST00000451006 455 ntBASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 YBX1P5-201ENST00000509441 847 ntBASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 AC112191.1-201ENST00000523689 701 ntBASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 ELL2P1-201ENST00000413990 1906 ntBASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 AC007950.2-201ENST00000615045 2347 ntBASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCC2Q8TAQ2 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 AC079781.4-201ENST00000641908 219 ntBASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 AL603832.2-201ENST00000566195 2125 ntBASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCC2Q8TAQ2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 AC140658.5-201ENST00000438532 169 ntBASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 AL031055.1-201ENST00000606362 631 ntBASIC19.27■□□□□ 0.68
SMARCC2Q8TAQ2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms