Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 AC007950.2-201ENST00000615045 2347 ntBASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 KRT18P3-201ENST00000451602 1288 ntBASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SIMC1Q8NDZ2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.58■□□□□ 0.09
SIMC1Q8NDZ2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 AC023274.1-201ENST00000418278 595 ntBASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 HCG4-201ENST00000418983 998 ntBASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 KRT19P2-202ENST00000557173 1012 ntBASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 AC027601.4-201ENST00000611259 610 ntBASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 AL139011.1-202ENST00000642063 584 ntBASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.58■□□□□ 0.08
SIMC1Q8NDZ2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 MIR1233-2-201ENST00000408138 82 ntBASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 MIR1233-1-201ENST00000408722 82 ntBASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SIMC1Q8NDZ2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms