Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.72■□□□□ 0.27
PGBD3Q8N328 AL358472.5-202ENST00000641448 1267 ntBASIC16.72■□□□□ 0.27
PGBD3Q8N328 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.72■□□□□ 0.27
PGBD3Q8N328 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PGBD3Q8N328 AC084018.2-201ENST00000613093 2607 ntBASIC16.72■□□□□ 0.27
PGBD3Q8N328 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PGBD3Q8N328 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.72■□□□□ 0.27
PGBD3Q8N328 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 SLC25A1P3-201ENST00000395415 828 ntBASIC16.71■□□□□ 0.27
PGBD3Q8N328 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 MTND6P24-201ENST00000440466 518 ntBASIC16.71■□□□□ 0.27
PGBD3Q8N328 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 AP005018.1-201ENST00000525475 301 ntBASIC16.71■□□□□ 0.27
PGBD3Q8N328 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
PGBD3Q8N328 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PGBD3Q8N328 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PGBD3Q8N328 FER1L4-210ENST00000615531 5998 ntBASIC16.71■□□□□ 0.26
PGBD3Q8N328 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 PIN1P1-201ENST00000412108 996 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 CRB3P1-201ENST00000449338 276 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 MIR4492-201ENST00000581627 80 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 AC007967.4-201ENST00000614700 386 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 AL138828.2-201ENST00000615812 383 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 SPDYE12P-201ENST00000618416 771 ntBASIC16.7■□□□□ 0.26
PGBD3Q8N328 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.7■□□□□ 0.26
PGBD3Q8N328 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PGBD3Q8N328 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms