Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 GPAA1P2-202ENST00000606848 1787 ntBASIC17.37■□□□□ 0.37
NUP93Q8N1F7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP93Q8N1F7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 RNF216P1-203ENST00000404404 2427 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AC022211.2-201ENST00000585075 2527 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ALG1L8P-201ENST00000533887 760 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AC069262.1-201ENST00000539058 672 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AL355385.1-201ENST00000606123 409 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AC078925.2-201ENST00000624013 1973 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 AL118508.1-201ENST00000613502 2345 ntBASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NUP93Q8N1F7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 SPDYE14P-201ENST00000442619 822 ntBASIC17.35■□□□□ 0.37
NUP93Q8N1F7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 AC015911.4-201ENST00000588022 1070 ntBASIC17.35■□□□□ 0.37
NUP93Q8N1F7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 Z92544.3-201ENST00000624747 417 ntBASIC17.35■□□□□ 0.37
NUP93Q8N1F7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 NKILA-202ENST00000614771 2598 ntBASIC17.35■□□□□ 0.37
NUP93Q8N1F7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NUP93Q8N1F7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms