Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 PCDHB17P-201ENST00000539533 2393 ntBASIC16.77■□□□□ 0.28
CHPFQ8IZ52 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 AC015922.1-201ENST00000421102 1152 ntBASIC16.77■□□□□ 0.28
CHPFQ8IZ52 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHPFQ8IZ52 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHPFQ8IZ52 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CHPFQ8IZ52 AC100757.3-201ENST00000622361 1406 ntBASIC16.77■□□□□ 0.27
CHPFQ8IZ52 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CHPFQ8IZ52 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.77■□□□□ 0.27
CHPFQ8IZ52 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AL353705.2-201ENST00000428243 662 ntBASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 SPTSSB-204ENST00000617024 1292 ntBASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AF228730.6-201ENST00000641497 218 ntBASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AC084121.3-201ENST00000641716 218 ntBASIC16.76■□□□□ 0.27
CHPFQ8IZ52 AC105233.6-201ENST00000642093 218 ntBASIC16.76■□□□□ 0.27
CHPFQ8IZ52 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHPFQ8IZ52 FOXO1B-201ENST00000504678 1527 ntBASIC16.75■□□□□ 0.27
CHPFQ8IZ52 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 AC004890.2-204ENST00000481968 304 ntBASIC16.75■□□□□ 0.27
CHPFQ8IZ52 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 SPDYE12P-201ENST00000618416 771 ntBASIC16.75■□□□□ 0.27
CHPFQ8IZ52 AL590560.3-201ENST00000623350 461 ntBASIC16.75■□□□□ 0.27
CHPFQ8IZ52 KRT8P39-201ENST00000396270 1433 ntBASIC16.75■□□□□ 0.27
CHPFQ8IZ52 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHPFQ8IZ52 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHPFQ8IZ52 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms