Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 KRT18P3-201ENST00000451602 1288 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 RNA5SP416-201ENST00000516838 111 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 KRT19P2-202ENST00000557173 1012 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AC140113.2-201ENST00000604370 208 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AC021097.1-201ENST00000607902 574 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AC027601.4-201ENST00000611259 610 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AC020765.3-201ENST00000613051 740 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 CYP2T1P-202ENST00000641596 2535 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 MST1L-201ENST00000442552 2185 ntBASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CCDC116Q8IYX3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 MED15P5-201ENST00000423150 992 ntBASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CCDC116Q8IYX3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CCDC116Q8IYX3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms