Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 AL033527.4-201ENST00000641026 673 ntBASIC17.76■□□□□ 0.43
HERC6Q8IVU3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.76■□□□□ 0.43
HERC6Q8IVU3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 MEP1AP4-201ENST00000423244 1087 ntBASIC17.75■□□□□ 0.43
HERC6Q8IVU3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 TPRX2P-201ENST00000535362 881 ntBASIC17.75■□□□□ 0.43
HERC6Q8IVU3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HERC6Q8IVU3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.74■□□□□ 0.43
HERC6Q8IVU3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 ELK1P1-201ENST00000485699 580 ntBASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC119751.2-201ENST00000504529 210 ntBASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 CTBP2P3-201ENST00000585629 1255 ntBASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC099568.2-201ENST00000609194 695 ntBASIC17.74■□□□□ 0.43
HERC6Q8IVU3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.74■□□□□ 0.43
HERC6Q8IVU3 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.74■□□□□ 0.43
HERC6Q8IVU3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms