Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 AD000864.1-201ENST00000624076 2295 ntBASIC17.48■□□□□ 0.39
RNF135Q8IUD6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SLC25A1P3-201ENST00000395415 828 ntBASIC17.48■□□□□ 0.39
RNF135Q8IUD6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 AC092658.1-201ENST00000505836 891 ntBASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF135Q8IUD6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 AC012569.1-201ENST00000591191 1524 ntBASIC17.47■□□□□ 0.39
RNF135Q8IUD6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 AC093525.9-201ENST00000624961 1746 ntBASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 FER1L4-210ENST00000615531 5998 ntBASIC17.47■□□□□ 0.39
RNF135Q8IUD6 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF135Q8IUD6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 DGCR5-201ENST00000399539 862 ntBASIC17.46■□□□□ 0.39
RNF135Q8IUD6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 AL512384.1-201ENST00000406683 331 ntBASIC17.46■□□□□ 0.39
RNF135Q8IUD6 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 AC132938.2-201ENST00000579188 680 ntBASIC17.46■□□□□ 0.39
RNF135Q8IUD6 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.46■□□□□ 0.39
RNF135Q8IUD6 AC018529.1-201ENST00000613063 361 ntBASIC17.46■□□□□ 0.39
RNF135Q8IUD6 AL591163.1-201ENST00000641757 987 ntBASIC17.46■□□□□ 0.39
RNF135Q8IUD6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms