Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 AL596087.1-201ENST00000400979 1969 ntBASIC17.2■□□□□ 0.34
RFX6Q8HWS3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RFX6Q8HWS3 PKD1P5-201ENST00000532415 10291 ntBASIC17.19■□□□□ 0.34
RFX6Q8HWS3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.19■□□□□ 0.34
RFX6Q8HWS3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.19■□□□□ 0.34
RFX6Q8HWS3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 AC006449.6-201ENST00000612330 2296 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 CRYGEP-201ENST00000412192 528 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 VN2R19P-201ENST00000442399 1052 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 AC009947.1-201ENST00000444350 727 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 POU5F1P6-201ENST00000466990 990 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 RNA5SP415-201ENST00000517246 115 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 AC020765.3-201ENST00000613051 740 ntBASIC17.18■□□□□ 0.34
RFX6Q8HWS3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RFX6Q8HWS3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.17■□□□□ 0.34
RFX6Q8HWS3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RFX6Q8HWS3 HMGA1P7-201ENST00000406908 502 ntBASIC17.17■□□□□ 0.34
RFX6Q8HWS3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms