Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 AP002414.4-201ENST00000589764 1148 ntBASIC17.11■□□□□ 0.33
CCDC25Q86WR0 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCDC25Q86WR0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AC079776.2-201ENST00000641154 1609 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 REXO1L8P-201ENST00000604378 1897 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 DRAXINP1-201ENST00000437611 948 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AC104640.1-201ENST00000562617 2109 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AL121956.5-201ENST00000625261 221 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AC002310.6-201ENST00000624451 1377 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AL513477.1-201ENST00000602865 2407 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 AP003680.1-201ENST00000598970 3660 ntBASIC17.1■□□□□ 0.33
CCDC25Q86WR0 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCDC25Q86WR0 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 AL031133.1-201ENST00000406807 723 ntBASIC17.09■□□□□ 0.33
CCDC25Q86WR0 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 IGHV3-47-201ENST00000425060 335 ntBASIC17.09■□□□□ 0.33
CCDC25Q86WR0 ABCD1P5-201ENST00000445663 754 ntBASIC17.09■□□□□ 0.33
CCDC25Q86WR0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 AL353135.1-201ENST00000606729 504 ntBASIC17.09■□□□□ 0.33
CCDC25Q86WR0 AC010331.1-201ENST00000611423 582 ntBASIC17.09■□□□□ 0.33
CCDC25Q86WR0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 TOP3BP1-201ENST00000420768 1380 ntBASIC17.09■□□□□ 0.33
CCDC25Q86WR0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCDC25Q86WR0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms