Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
LYSMD3Q7Z3D4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 AL671277.1-201ENST00000429656 993 ntBASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 CEND1P1-201ENST00000451006 455 ntBASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 AC020765.3-201ENST00000613051 740 ntBASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 AC012183.1-201ENST00000625197 499 ntBASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.58■□□□□ 0.24
LYSMD3Q7Z3D4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AC004967.1-201ENST00000453589 447 ntBASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 KRT18P34-201ENST00000488218 1270 ntBASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 YBX1P5-201ENST00000509441 847 ntBASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AL135744.1-201ENST00000565098 629 ntBASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LYSMD3Q7Z3D4 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 TFAMP1-201ENST00000412727 736 ntBASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC211486.1-202ENST00000416371 468 ntBASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC211476.1-201ENST00000503899 468 ntBASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC134684.3-201ENST00000641758 218 ntBASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 AC079781.4-201ENST00000641908 219 ntBASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD3Q7Z3D4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms