Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHFQ7M4L6 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.98□□□□□ -0.01
SHFQ7M4L6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 AL031731.1-201ENST00000642131 2094 ntBASIC14.97□□□□□ -0.01
SHFQ7M4L6 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 AP003680.1-201ENST00000598970 3660 ntBASIC14.97□□□□□ -0.01
SHFQ7M4L6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 AC092119.3-201ENST00000612618 583 ntBASIC14.97□□□□□ -0.01
SHFQ7M4L6 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 AL358472.4-201ENST00000633140 710 ntBASIC14.97□□□□□ -0.01
SHFQ7M4L6 AL022326.1-202ENST00000641533 845 ntBASIC14.97□□□□□ -0.01
SHFQ7M4L6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 AC126177.1-201ENST00000547829 2218 ntBASIC14.97□□□□□ -0.01
SHFQ7M4L6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC14.97□□□□□ -0.01
SHFQ7M4L6 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHFQ7M4L6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 AC132008.2-207ENST00000454517 770 ntBASIC14.96□□□□□ -0.01
SHFQ7M4L6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.96□□□□□ -0.01
SHFQ7M4L6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SHFQ7M4L6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHFQ7M4L6 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SHFQ7M4L6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHFQ7M4L6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHFQ7M4L6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SHFQ7M4L6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms