Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 NKILA-202ENST00000614771 2598 ntBASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 AC107890.1-201ENST00000422478 521 ntBASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 RARRES2P9-201ENST00000565168 469 ntBASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 AL512652.2-201ENST00000625156 1716 ntBASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
H3F3CQ6NXT2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 AC011676.5-201ENST00000624864 2660 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 FAM8A3P-201ENST00000427218 844 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 BCRP1-201ENST00000444246 691 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 RNA5SP421-201ENST00000516864 134 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 AC092364.2-202ENST00000597012 1073 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 AC018529.1-201ENST00000613063 361 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 SPTSSB-204ENST00000617024 1292 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 MST1L-201ENST00000442552 2185 ntBASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
H3F3CQ6NXT2 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
H3F3CQ6NXT2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms