Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 BASP1P1-201ENST00000430708 665 ntBASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SWSAP1Q6NVH7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 INGX-202ENST00000489074 768 ntBASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 AC027369.6-201ENST00000525520 931 ntBASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
SWSAP1Q6NVH7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 AC105021.1-202ENST00000570572 669 ntBASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 LINC02084-201ENST00000606069 1096 ntBASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SWSAP1Q6NVH7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
SWSAP1Q6NVH7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms