Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LRRK2Q5S007 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.08□□□□□ -0.16
LRRK2Q5S007 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC024267.1-201ENST00000582320 895 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC108860.2-201ENST00000562760 2183 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC069218.1-201ENST00000435269 762 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 BRI3BPP1-201ENST00000594224 787 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC133539.2-201ENST00000604757 467 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 AL353726.2-201ENST00000623259 884 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 AC005252.2-201ENST00000624630 1141 ntBASIC14.07□□□□□ -0.16
LRRK2Q5S007 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC14.07□□□□□ -0.16
LRRK2Q5S007 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
LRRK2Q5S007 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 AC006001.1-201ENST00000325130 474 ntBASIC14.06□□□□□ -0.16
LRRK2Q5S007 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC14.06□□□□□ -0.16
LRRK2Q5S007 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
LRRK2Q5S007 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRK2Q5S007 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.06□□□□□ -0.16
LRRK2Q5S007 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
LRRK2Q5S007 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
LRRK2Q5S007 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms