Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 SPDYE12P-201ENST00000618416 771 ntBASIC19.82■□□□□ 0.76
RFX7Q2KHR2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RFX7Q2KHR2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC005622.1-201ENST00000636801 1703 ntBASIC19.81■□□□□ 0.76
RFX7Q2KHR2 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 TSSK5P-201ENST00000423978 907 ntBASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC097493.3-201ENST00000509725 367 ntBASIC19.81■□□□□ 0.76
RFX7Q2KHR2 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 RN7SL204P-201ENST00000582831 262 ntBASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RFX7Q2KHR2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 MRPS18AP1-201ENST00000414458 589 ntBASIC19.8■□□□□ 0.76
RFX7Q2KHR2 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 MIR4453-201ENST00000584019 89 ntBASIC19.8■□□□□ 0.76
RFX7Q2KHR2 AC007967.4-201ENST00000614700 386 ntBASIC19.8■□□□□ 0.76
RFX7Q2KHR2 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX7Q2KHR2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 FAM207CP-201ENST00000443486 507 ntBASIC19.79■□□□□ 0.76
RFX7Q2KHR2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 AC004890.2-204ENST00000481968 304 ntBASIC19.79■□□□□ 0.76
RFX7Q2KHR2 INGX-202ENST00000489074 768 ntBASIC19.79■□□□□ 0.76
RFX7Q2KHR2 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX7Q2KHR2 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms