Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.9□□□□□ -0.02
CDK5Q00535 AC006504.4-201ENST00000592118 1568 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.9□□□□□ -0.02
CDK5Q00535 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 PAN3-AS1-201ENST00000563843 1351 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK5Q00535 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK5Q00535 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK5Q00535 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK5Q00535 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.9□□□□□ -0.02
CDK5Q00535 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.9□□□□□ -0.02
CDK5Q00535 SART3-203ENST00000546611 1184 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 AC087388.1-201ENST00000571370 1112 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CDK5Q00535 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CDK5Q00535 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 PPT1-215ENST00000641471 2368 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 AC006058.4-201ENST00000624016 1670 ntBASIC14.9□□□□□ -0.02
CDK5Q00535 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
CDK5Q00535 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.9□□□□□ -0.02
CDK5Q00535 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDK5Q00535 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDK5Q00535 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.89□□□□□ -0.03
CDK5Q00535 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDK5Q00535 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.89□□□□□ -0.03
CDK5Q00535 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CDK5Q00535 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK5Q00535 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.89□□□□□ -0.03
CDK5Q00535 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDK5Q00535 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CDK5Q00535 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK5Q00535 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK5Q00535 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.89□□□□□ -0.03
CDK5Q00535 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.89□□□□□ -0.03
CDK5Q00535 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.89□□□□□ -0.03
CDK5Q00535 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.89□□□□□ -0.03
CDK5Q00535 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CDK5Q00535 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.89□□□□□ -0.03
CDK5Q00535 AL732292.2-201ENST00000609649 430 ntBASIC14.89□□□□□ -0.03
CDK5Q00535 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CDK5Q00535 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.89□□□□□ -0.03
CDK5Q00535 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.89□□□□□ -0.03
CDK5Q00535 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
CDK5Q00535 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CDK5Q00535 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CDK5Q00535 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.88□□□□□ -0.03
CDK5Q00535 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDK5Q00535 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDK5Q00535 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
CDK5Q00535 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 ARMC10P1-201ENST00000313754 855 ntBASIC14.88□□□□□ -0.03
CDK5Q00535 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.88□□□□□ -0.03
CDK5Q00535 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.88□□□□□ -0.03
CDK5Q00535 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CDK5Q00535 FGFR3P6-201ENST00000457012 610 ntBASIC14.88□□□□□ -0.03
CDK5Q00535 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 KRT18P21-201ENST00000515767 1272 ntBASIC14.88□□□□□ -0.03
CDK5Q00535 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.88□□□□□ -0.03
CDK5Q00535 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
CDK5Q00535 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.88□□□□□ -0.03
CDK5Q00535 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.88□□□□□ -0.03
CDK5Q00535 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms