Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CBX1P83916 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CBX1P83916 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX1P83916 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CBX1P83916 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CBX1P83916 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CBX1P83916 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.27■□□□□ 0.35
CBX1P83916 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CBX1P83916 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.26■□□□□ 0.35
CBX1P83916 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.26■□□□□ 0.35
CBX1P83916 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.26■□□□□ 0.35
CBX1P83916 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.26■□□□□ 0.35
CBX1P83916 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CBX1P83916 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 AJ011931.1-201ENST00000618749 2492 ntBASIC17.26■□□□□ 0.35
CBX1P83916 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.26■□□□□ 0.35
CBX1P83916 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.26■□□□□ 0.35
CBX1P83916 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CBX1P83916 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 TUBB8P12-201ENST00000308911 1335 ntBASIC17.25■□□□□ 0.35
CBX1P83916 TUBB7P-202ENST00000428444 1305 ntBASIC17.25■□□□□ 0.35
CBX1P83916 TUBB8P7-204ENST00000567960 1332 ntBASIC17.25■□□□□ 0.35
CBX1P83916 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CBX1P83916 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.25■□□□□ 0.35
CBX1P83916 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.25■□□□□ 0.35
CBX1P83916 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.25■□□□□ 0.35
CBX1P83916 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 RARRES2P6-201ENST00000567333 442 ntBASIC17.25■□□□□ 0.35
CBX1P83916 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CBX1P83916 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CBX1P83916 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.25■□□□□ 0.35
CBX1P83916 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.25■□□□□ 0.35
CBX1P83916 MIR5787-201ENST00000611784 55 ntBASIC17.25■□□□□ 0.35
CBX1P83916 AC092118.2-201ENST00000613495 667 ntBASIC17.25■□□□□ 0.35
CBX1P83916 AC131212.4-201ENST00000623606 975 ntBASIC17.25■□□□□ 0.35
CBX1P83916 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CBX1P83916 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC17.25■□□□□ 0.35
CBX1P83916 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms