Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.08■□□□□ 0.16
YBX1P67809 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.08■□□□□ 0.16
YBX1P67809 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.08■□□□□ 0.16
YBX1P67809 AC006538.1-201ENST00000567905 1585 ntBASIC16.08■□□□□ 0.16
YBX1P67809 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.08■□□□□ 0.16
YBX1P67809 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
YBX1P67809 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
YBX1P67809 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.08■□□□□ 0.16
YBX1P67809 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
YBX1P67809 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.07■□□□□ 0.16
YBX1P67809 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 RPSAP43-201ENST00000402237 625 ntBASIC16.07■□□□□ 0.16
YBX1P67809 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 FAM58CP-201ENST00000435741 640 ntBASIC16.07■□□□□ 0.16
YBX1P67809 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.07■□□□□ 0.16
YBX1P67809 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 AP002490.2-201ENST00000524791 560 ntBASIC16.07■□□□□ 0.16
YBX1P67809 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.07■□□□□ 0.16
YBX1P67809 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.07■□□□□ 0.16
YBX1P67809 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.07■□□□□ 0.16
YBX1P67809 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 AL009183.1-201ENST00000603760 355 ntBASIC16.07■□□□□ 0.16
YBX1P67809 AC099522.2-201ENST00000607001 744 ntBASIC16.07■□□□□ 0.16
YBX1P67809 AC023511.2-201ENST00000618803 211 ntBASIC16.07■□□□□ 0.16
YBX1P67809 AC055717.3-201ENST00000622967 595 ntBASIC16.07■□□□□ 0.16
YBX1P67809 AC092902.6-201ENST00000641783 218 ntBASIC16.07■□□□□ 0.16
YBX1P67809 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.07■□□□□ 0.16
YBX1P67809 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.07■□□□□ 0.16
YBX1P67809 GGT4P-201ENST00000623672 1708 ntBASIC16.07■□□□□ 0.16
YBX1P67809 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.07■□□□□ 0.16
YBX1P67809 AC144831.1-201ENST00000573312 2656 ntBASIC16.07■□□□□ 0.16
YBX1P67809 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
YBX1P67809 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
YBX1P67809 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 GPX1P2-201ENST00000429271 606 ntBASIC16.06■□□□□ 0.16
YBX1P67809 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.06■□□□□ 0.16
YBX1P67809 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 AP001350.2-201ENST00000625104 1094 ntBASIC16.06■□□□□ 0.16
YBX1P67809 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.06■□□□□ 0.16
YBX1P67809 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
YBX1P67809 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.06■□□□□ 0.16
YBX1P67809 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms