Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.36■□□□□ 0.37
USP46P62068 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 MIR770-201ENST00000390219 98 ntBASIC17.35■□□□□ 0.37
USP46P62068 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.35■□□□□ 0.37
USP46P62068 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 AC051619.7-201ENST00000568314 623 ntBASIC17.35■□□□□ 0.37
USP46P62068 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 AC005498.2-205ENST00000593218 784 ntBASIC17.35■□□□□ 0.37
USP46P62068 AL390955.2-201ENST00000603032 514 ntBASIC17.35■□□□□ 0.37
USP46P62068 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
USP46P62068 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
USP46P62068 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
USP46P62068 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 TUBB3P1-201ENST00000405796 1332 ntBASIC17.34■□□□□ 0.37
USP46P62068 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 CNN2P2-201ENST00000443536 909 ntBASIC17.34■□□□□ 0.37
USP46P62068 CNN2P3-201ENST00000450201 906 ntBASIC17.34■□□□□ 0.37
USP46P62068 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.34■□□□□ 0.37
USP46P62068 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.34■□□□□ 0.37
USP46P62068 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
USP46P62068 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 AL136317.3-201ENST00000618497 906 ntBASIC17.34■□□□□ 0.37
USP46P62068 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.34■□□□□ 0.37
USP46P62068 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.34■□□□□ 0.37
USP46P62068 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP46P62068 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.33■□□□□ 0.37
USP46P62068 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP46P62068 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.33■□□□□ 0.37
USP46P62068 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.33■□□□□ 0.37
USP46P62068 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP46P62068 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP46P62068 GGT4P-201ENST00000623672 1708 ntBASIC17.33■□□□□ 0.37
USP46P62068 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.33■□□□□ 0.37
USP46P62068 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
USP46P62068 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.37
USP46P62068 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP46P62068 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
USP46P62068 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
USP46P62068 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.33■□□□□ 0.36
USP46P62068 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.33■□□□□ 0.36
USP46P62068 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
USP46P62068 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP46P62068 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
USP46P62068 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
USP46P62068 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms