Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 FAM220BP-201ENST00000377689 816 ntBASIC21.51■■□□□ 1.03
RIPK4P57078 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RIPK4P57078 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC21.51■■□□□ 1.03
RIPK4P57078 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.51■■□□□ 1.03
RIPK4P57078 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.51■■□□□ 1.03
RIPK4P57078 RFPL4AP1-201ENST00000530883 850 ntBASIC21.51■■□□□ 1.03
RIPK4P57078 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.51■■□□□ 1.03
RIPK4P57078 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.51■■□□□ 1.03
RIPK4P57078 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.51■■□□□ 1.03
RIPK4P57078 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC21.51■■□□□ 1.03
RIPK4P57078 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.51■■□□□ 1.03
RIPK4P57078 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.51■■□□□ 1.03
RIPK4P57078 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC21.51■■□□□ 1.03
RIPK4P57078 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RIPK4P57078 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC21.5■■□□□ 1.03
RIPK4P57078 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RIPK4P57078 POU5F1P6-201ENST00000466990 990 ntBASIC21.5■■□□□ 1.03
RIPK4P57078 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.5■■□□□ 1.03
RIPK4P57078 AC106028.4-201ENST00000614509 607 ntBASIC21.5■■□□□ 1.03
RIPK4P57078 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.5■■□□□ 1.03
RIPK4P57078 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 AC011270.2-201ENST00000624293 2550 ntBASIC21.5■■□□□ 1.03
RIPK4P57078 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RIPK4P57078 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC21.5■■□□□ 1.03
RIPK4P57078 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RIPK4P57078 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RIPK4P57078 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC21.49■■□□□ 1.03
RIPK4P57078 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
RIPK4P57078 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RIPK4P57078 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.49■■□□□ 1.03
RIPK4P57078 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
RIPK4P57078 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 HLA-H-201ENST00000383620 1096 ntBASIC21.49■■□□□ 1.03
RIPK4P57078 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.49■■□□□ 1.03
RIPK4P57078 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.49■■□□□ 1.03
RIPK4P57078 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 AC018529.1-201ENST00000613063 361 ntBASIC21.49■■□□□ 1.03
RIPK4P57078 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.49■■□□□ 1.03
RIPK4P57078 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RIPK4P57078 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC21.48■■□□□ 1.03
RIPK4P57078 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.48■■□□□ 1.03
RIPK4P57078 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC21.48■■□□□ 1.03
RIPK4P57078 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.48■■□□□ 1.03
RIPK4P57078 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RIPK4P57078 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.48■■□□□ 1.03
RIPK4P57078 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC21.48■■□□□ 1.03
RIPK4P57078 MIR4453-201ENST00000584019 89 ntBASIC21.48■■□□□ 1.03
RIPK4P57078 AC015911.4-201ENST00000588022 1070 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms