Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AL096865.1-201ENST00000606796 927 ntBASIC15.57■□□□□ 0.08
GABRA4P48169 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.57■□□□□ 0.08
GABRA4P48169 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.57■□□□□ 0.08
GABRA4P48169 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.57■□□□□ 0.08
GABRA4P48169 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.57■□□□□ 0.08
GABRA4P48169 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
GABRA4P48169 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
GABRA4P48169 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.56■□□□□ 0.08
GABRA4P48169 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.56■□□□□ 0.08
GABRA4P48169 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 AC011676.5-201ENST00000624864 2660 ntBASIC15.56■□□□□ 0.08
GABRA4P48169 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
GABRA4P48169 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.56■□□□□ 0.08
GABRA4P48169 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.56■□□□□ 0.08
GABRA4P48169 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.56■□□□□ 0.08
GABRA4P48169 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.56■□□□□ 0.08
GABRA4P48169 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.56■□□□□ 0.08
GABRA4P48169 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.56■□□□□ 0.08
GABRA4P48169 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.56■□□□□ 0.08
GABRA4P48169 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 AL133215.2-201ENST00000609242 977 ntBASIC15.56■□□□□ 0.08
GABRA4P48169 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.56■□□□□ 0.08
GABRA4P48169 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
GABRA4P48169 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
GABRA4P48169 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GABRA4P48169 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.55■□□□□ 0.08
GABRA4P48169 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.55■□□□□ 0.08
GABRA4P48169 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.55■□□□□ 0.08
GABRA4P48169 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
GABRA4P48169 AL035456.1-201ENST00000456064 1369 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.55■□□□□ 0.08
GABRA4P48169 AL353705.2-201ENST00000428243 662 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.55■□□□□ 0.08
GABRA4P48169 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.55■□□□□ 0.08
GABRA4P48169 POU5F1P6-201ENST00000466990 990 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 AC093214.1-201ENST00000511688 1107 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.55■□□□□ 0.08
GABRA4P48169 AC105021.1-202ENST00000570572 669 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 AC024267.1-201ENST00000582320 895 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 AC011467.4-201ENST00000594891 528 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 RN7SL828P-201ENST00000607615 303 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 SPDYE12P-201ENST00000618416 771 ntBASIC15.55■□□□□ 0.08
GABRA4P48169 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.55■□□□□ 0.08
GABRA4P48169 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
GABRA4P48169 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.55■□□□□ 0.08
GABRA4P48169 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
GABRA4P48169 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
GABRA4P48169 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.55■□□□□ 0.08
GABRA4P48169 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
GABRA4P48169 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms