Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.2■□□□□ 0.34
MTHFRP42898 PGF-202ENST00000405431 666 ntTSL 5 BASIC17.2■□□□□ 0.34
MTHFRP42898 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.2■□□□□ 0.34
MTHFRP42898 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.2■□□□□ 0.34
MTHFRP42898 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.2■□□□□ 0.34
MTHFRP42898 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.2■□□□□ 0.34
MTHFRP42898 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
MTHFRP42898 AC007431.3-201ENST00000623221 587 ntBASIC17.2■□□□□ 0.34
MTHFRP42898 AL023806.1-201ENST00000603994 1649 ntBASIC17.2■□□□□ 0.34
MTHFRP42898 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.2■□□□□ 0.34
MTHFRP42898 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.2■□□□□ 0.34
MTHFRP42898 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MTHFRP42898 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.19■□□□□ 0.34
MTHFRP42898 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 SLC7A15P-201ENST00000424028 1363 ntBASIC17.19■□□□□ 0.34
MTHFRP42898 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
MTHFRP42898 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.19■□□□□ 0.34
MTHFRP42898 MIR658-201ENST00000385210 100 ntBASIC17.19■□□□□ 0.34
MTHFRP42898 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 AC112492.5-201ENST00000421897 457 ntBASIC17.19■□□□□ 0.34
MTHFRP42898 AC055876.2-201ENST00000531834 546 ntBASIC17.19■□□□□ 0.34
MTHFRP42898 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.19■□□□□ 0.34
MTHFRP42898 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.19■□□□□ 0.34
MTHFRP42898 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.19■□□□□ 0.34
MTHFRP42898 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.19■□□□□ 0.34
MTHFRP42898 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MTHFRP42898 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.19■□□□□ 0.34
MTHFRP42898 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.19■□□□□ 0.34
MTHFRP42898 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MTHFRP42898 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 MEP1AP4-201ENST00000423244 1087 ntBASIC17.18■□□□□ 0.34
MTHFRP42898 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.18■□□□□ 0.34
MTHFRP42898 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.18■□□□□ 0.34
MTHFRP42898 WASH4P-201ENST00000564273 1246 ntBASIC17.18■□□□□ 0.34
MTHFRP42898 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.18■□□□□ 0.34
MTHFRP42898 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.18■□□□□ 0.34
MTHFRP42898 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.18■□□□□ 0.34
MTHFRP42898 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 PP12613-201ENST00000424958 2230 ntBASIC17.18■□□□□ 0.34
MTHFRP42898 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
MTHFRP42898 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.18■□□□□ 0.34
MTHFRP42898 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.18■□□□□ 0.34
MTHFRP42898 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms