Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT9P35527 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT9P35527 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT9P35527 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
KRT9P35527 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
KRT9P35527 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.09■□□□□ 0.49
KRT9P35527 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 KRT18P67-201ENST00000432816 1264 ntBASIC18.09■□□□□ 0.49
KRT9P35527 AC079781.3-201ENST00000449110 356 ntBASIC18.09■□□□□ 0.49
KRT9P35527 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.09■□□□□ 0.49
KRT9P35527 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.09■□□□□ 0.49
KRT9P35527 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.09■□□□□ 0.49
KRT9P35527 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 REXO1L3P-201ENST00000622202 1288 ntBASIC18.09■□□□□ 0.49
KRT9P35527 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.09■□□□□ 0.49
KRT9P35527 AF228730.7-201ENST00000641842 219 ntBASIC18.09■□□□□ 0.49
KRT9P35527 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 AC103702.1-201ENST00000548801 2630 ntBASIC18.09■□□□□ 0.49
KRT9P35527 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.09■□□□□ 0.49
KRT9P35527 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
KRT9P35527 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.08■□□□□ 0.49
KRT9P35527 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.08■□□□□ 0.49
KRT9P35527 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.08■□□□□ 0.49
KRT9P35527 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
KRT9P35527 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
KRT9P35527 REXO1L8P-201ENST00000604378 1897 ntBASIC18.08■□□□□ 0.49
KRT9P35527 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.08■□□□□ 0.49
KRT9P35527 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.08■□□□□ 0.49
KRT9P35527 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 AC087163.2-201ENST00000457299 853 ntBASIC18.08■□□□□ 0.48
KRT9P35527 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.08■□□□□ 0.48
KRT9P35527 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.08■□□□□ 0.48
KRT9P35527 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.08■□□□□ 0.48
KRT9P35527 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
KRT9P35527 MIR1199-201ENST00000621445 119 ntBASIC18.08■□□□□ 0.48
KRT9P35527 AC008735.5-201ENST00000623544 497 ntBASIC18.08■□□□□ 0.48
KRT9P35527 AL805961.1-202ENST00000641562 540 ntBASIC18.08■□□□□ 0.48
KRT9P35527 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 AC131009.4-201ENST00000624048 1740 ntBASIC18.08■□□□□ 0.48
KRT9P35527 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
KRT9P35527 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
KRT9P35527 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
KRT9P35527 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
KRT9P35527 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KRT9P35527 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
KRT9P35527 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 PCGF3-213ENST00000620529 1899 ntBASIC18.07■□□□□ 0.48
KRT9P35527 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KRT9P35527 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KRT9P35527 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms