Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CKS2P33552 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC12.2□□□□□ -0.46
CKS2P33552 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.2□□□□□ -0.46
CKS2P33552 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CKS2P33552 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 FAM45BP-202ENST00000592932 1624 ntBASIC12.19□□□□□ -0.46
CKS2P33552 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.19□□□□□ -0.46
CKS2P33552 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
CKS2P33552 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
CKS2P33552 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC12.19□□□□□ -0.46
CKS2P33552 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
CKS2P33552 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
CKS2P33552 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC12.19□□□□□ -0.46
CKS2P33552 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS2P33552 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.18□□□□□ -0.46
CKS2P33552 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 ECEL1P3-201ENST00000427961 737 ntBASIC12.18□□□□□ -0.46
CKS2P33552 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.18□□□□□ -0.46
CKS2P33552 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 AC090192.1-201ENST00000517740 490 ntBASIC12.18□□□□□ -0.46
CKS2P33552 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
CKS2P33552 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.18□□□□□ -0.46
CKS2P33552 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC12.18□□□□□ -0.46
CKS2P33552 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.18□□□□□ -0.46
CKS2P33552 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CKS2P33552 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS2P33552 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 FOS-208ENST00000555686 1496 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.18□□□□□ -0.46
CKS2P33552 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms