Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTPREP23469 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTPREP23469 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPREP23469 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPREP23469 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.22■□□□□ 0.67
PTPREP23469 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPREP23469 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPREP23469 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.22■□□□□ 0.67
PTPREP23469 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPREP23469 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPREP23469 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PTPREP23469 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPREP23469 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTPREP23469 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.22■□□□□ 0.67
PTPREP23469 AC006277.1-201ENST00000624348 1610 ntBASIC19.22■□□□□ 0.67
PTPREP23469 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
PTPREP23469 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPREP23469 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.21■□□□□ 0.67
PTPREP23469 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPREP23469 MIR4453-201ENST00000584019 89 ntBASIC19.21■□□□□ 0.67
PTPREP23469 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPREP23469 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPREP23469 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTPREP23469 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.21■□□□□ 0.67
PTPREP23469 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.21■□□□□ 0.67
PTPREP23469 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
PTPREP23469 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PTPREP23469 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PTPREP23469 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
PTPREP23469 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPREP23469 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.2■□□□□ 0.66
PTPREP23469 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPREP23469 GAPDHP21-201ENST00000450301 1010 ntBASIC19.2■□□□□ 0.66
PTPREP23469 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPREP23469 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPREP23469 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.2■□□□□ 0.66
PTPREP23469 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPREP23469 AC016027.1-202ENST00000607927 1699 ntBASIC19.2■□□□□ 0.66
PTPREP23469 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.2■□□□□ 0.66
PTPREP23469 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTPREP23469 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PTPREP23469 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPREP23469 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PTPREP23469 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PTPREP23469 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPREP23469 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.19■□□□□ 0.66
PTPREP23469 HLA-J-202ENST00000469281 1241 ntBASIC19.19■□□□□ 0.66
PTPREP23469 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPREP23469 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPREP23469 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPREP23469 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.19■□□□□ 0.66
PTPREP23469 AL139011.1-202ENST00000642063 584 ntBASIC19.19■□□□□ 0.66
PTPREP23469 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PTPREP23469 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.19■□□□□ 0.66
PTPREP23469 AC006538.1-201ENST00000567905 1585 ntBASIC19.19■□□□□ 0.66
PTPREP23469 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
PTPREP23469 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PTPREP23469 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC19.19■□□□□ 0.66
PTPREP23469 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.18■□□□□ 0.66
PTPREP23469 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
PTPREP23469 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms