Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 CRYGFP-201ENST00000418459 633 ntBASIC12.72□□□□□ -0.37
RAB4AP20338 AC116562.2-201ENST00000507042 360 ntBASIC12.72□□□□□ -0.37
RAB4AP20338 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.72□□□□□ -0.37
RAB4AP20338 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 AL356585.2-201ENST00000625078 2396 ntBASIC12.72□□□□□ -0.37
RAB4AP20338 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
RAB4AP20338 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RAB4AP20338 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RAB4AP20338 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RAB4AP20338 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB4AP20338 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 AC093525.9-201ENST00000624961 1746 ntBASIC12.71□□□□□ -0.37
RAB4AP20338 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 CICP23-201ENST00000605013 2741 ntBASIC12.71□□□□□ -0.37
RAB4AP20338 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB4AP20338 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB4AP20338 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC12.71□□□□□ -0.37
RAB4AP20338 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 KLF13-207ENST00000560473 489 ntTSL 3 BASIC12.71□□□□□ -0.37
RAB4AP20338 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 AL139327.4-201ENST00000612362 153 ntBASIC12.71□□□□□ -0.37
RAB4AP20338 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
RAB4AP20338 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RAB4AP20338 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.71□□□□□ -0.37
RAB4AP20338 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.71□□□□□ -0.38
RAB4AP20338 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
RAB4AP20338 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB4AP20338 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
RAB4AP20338 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RAB4AP20338 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
RAB4AP20338 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB4AP20338 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB4AP20338 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
RAB4AP20338 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB4AP20338 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.71□□□□□ -0.38
RAB4AP20338 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC12.71□□□□□ -0.38
RAB4AP20338 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RAB4AP20338 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC12.71□□□□□ -0.38
RAB4AP20338 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms