Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
BMP4P12644 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
BMP4P12644 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.21■□□□□ 0.03
BMP4P12644 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.21■□□□□ 0.03
BMP4P12644 HLA-A-201ENST00000376802 1334 ntBASIC15.21■□□□□ 0.03
BMP4P12644 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 AC010491.1-201ENST00000563101 2797 ntBASIC15.21■□□□□ 0.03
BMP4P12644 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
BMP4P12644 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 MRPL3P1-201ENST00000400109 1033 ntBASIC15.21■□□□□ 0.03
BMP4P12644 AL031284.1-201ENST00000419297 478 ntBASIC15.21■□□□□ 0.03
BMP4P12644 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.21■□□□□ 0.03
BMP4P12644 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
BMP4P12644 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.21■□□□□ 0.03
BMP4P12644 AL139327.4-201ENST00000612362 153 ntBASIC15.21■□□□□ 0.03
BMP4P12644 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
BMP4P12644 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.21■□□□□ 0.03
BMP4P12644 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
BMP4P12644 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BMP4P12644 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BMP4P12644 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BMP4P12644 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.21■□□□□ 0.02
BMP4P12644 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.21■□□□□ 0.02
BMP4P12644 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.21■□□□□ 0.02
BMP4P12644 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
BMP4P12644 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
BMP4P12644 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
BMP4P12644 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
BMP4P12644 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 AP005117.1-201ENST00000584346 1413 ntBASIC15.2■□□□□ 0.02
BMP4P12644 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.2■□□□□ 0.02
BMP4P12644 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.2■□□□□ 0.02
BMP4P12644 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 RNPS1P1-201ENST00000507437 918 ntBASIC15.2■□□□□ 0.02
BMP4P12644 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.2■□□□□ 0.02
BMP4P12644 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.2■□□□□ 0.02
BMP4P12644 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.2■□□□□ 0.02
BMP4P12644 AC120114.3-201ENST00000611923 658 ntBASIC15.2■□□□□ 0.02
BMP4P12644 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.2■□□□□ 0.02
BMP4P12644 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.2■□□□□ 0.02
BMP4P12644 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.2■□□□□ 0.02
BMP4P12644 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.2■□□□□ 0.02
BMP4P12644 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
BMP4P12644 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
BMP4P12644 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
BMP4P12644 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
BMP4P12644 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
BMP4P12644 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BMP4P12644 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
BMP4P12644 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
BMP4P12644 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC15.19■□□□□ 0.02
BMP4P12644 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.19■□□□□ 0.02
BMP4P12644 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms