Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RPL28-207ENST00000558815 616 ntTSL 2 BASIC28.28■■■□□ 2.12
TOP2AP11388 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TOP2AP11388 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TOP2AP11388 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
TOP2AP11388 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC28.28■■■□□ 2.12
TOP2AP11388 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TOP2AP11388 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
TOP2AP11388 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC28.28■■■□□ 2.12
TOP2AP11388 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC28.28■■■□□ 2.12
TOP2AP11388 AC133539.2-201ENST00000604757 467 ntBASIC28.28■■■□□ 2.12
TOP2AP11388 AL022328.1-201ENST00000610050 478 ntBASIC28.28■■■□□ 2.12
TOP2AP11388 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
TOP2AP11388 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC28.27■■■□□ 2.12
TOP2AP11388 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TOP2AP11388 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TOP2AP11388 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC28.27■■■□□ 2.12
TOP2AP11388 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC28.27■■■□□ 2.12
TOP2AP11388 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC28.27■■■□□ 2.12
TOP2AP11388 SOCS2P1-201ENST00000417727 557 ntBASIC28.27■■■□□ 2.12
TOP2AP11388 RPL7P3-201ENST00000441388 714 ntBASIC28.27■■■□□ 2.12
TOP2AP11388 CSF2RBP1-201ENST00000447905 391 ntBASIC28.27■■■□□ 2.12
TOP2AP11388 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC28.27■■■□□ 2.12
TOP2AP11388 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC28.27■■■□□ 2.12
TOP2AP11388 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC28.27■■■□□ 2.12
TOP2AP11388 AC099548.2-209ENST00000480264 625 ntBASIC28.27■■■□□ 2.12
TOP2AP11388 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC28.27■■■□□ 2.12
TOP2AP11388 AP001889.1-201ENST00000525414 633 ntBASIC28.27■■■□□ 2.12
TOP2AP11388 AP000812.2-201ENST00000538934 718 ntBASIC28.27■■■□□ 2.12
TOP2AP11388 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC28.27■■■□□ 2.12
TOP2AP11388 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC28.27■■■□□ 2.12
TOP2AP11388 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
TOP2AP11388 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC28.27■■■□□ 2.12
TOP2AP11388 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
TOP2AP11388 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC28.26■■■□□ 2.12
TOP2AP11388 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
TOP2AP11388 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC28.26■■■□□ 2.11
TOP2AP11388 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TOP2AP11388 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TOP2AP11388 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
TOP2AP11388 AC136604.1-201ENST00000418535 575 ntBASIC28.26■■■□□ 2.11
TOP2AP11388 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC28.26■■■□□ 2.11
TOP2AP11388 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
TOP2AP11388 ELP6-209ENST00000446787 894 ntTSL 3 BASIC28.26■■■□□ 2.11
TOP2AP11388 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC28.26■■■□□ 2.11
TOP2AP11388 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
TOP2AP11388 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TOP2AP11388 AC000095.1-201ENST00000603208 874 ntBASIC28.26■■■□□ 2.11
TOP2AP11388 MIR6787-201ENST00000616675 61 ntBASIC28.26■■■□□ 2.11
TOP2AP11388 MIR6869-201ENST00000619434 62 ntBASIC28.26■■■□□ 2.11
TOP2AP11388 AC005252.2-201ENST00000624630 1141 ntBASIC28.26■■■□□ 2.11
TOP2AP11388 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC28.26■■■□□ 2.11
TOP2AP11388 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
TOP2AP11388 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
TOP2AP11388 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TOP2AP11388 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
TOP2AP11388 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
TOP2AP11388 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TOP2AP11388 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
TOP2AP11388 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC28.25■■■□□ 2.11
TOP2AP11388 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
TOP2AP11388 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC28.25■■■□□ 2.11
TOP2AP11388 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC28.25■■■□□ 2.11
TOP2AP11388 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC28.25■■■□□ 2.11
TOP2AP11388 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC28.25■■■□□ 2.11
TOP2AP11388 KRT8P44-201ENST00000441609 1350 ntBASIC28.25■■■□□ 2.11
TOP2AP11388 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC28.25■■■□□ 2.11
TOP2AP11388 BNIP3P1-202ENST00000550043 1585 ntBASIC28.25■■■□□ 2.11
TOP2AP11388 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC28.25■■■□□ 2.11
TOP2AP11388 AL645608.8-201ENST00000606034 2086 ntBASIC28.25■■■□□ 2.11
TOP2AP11388 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC28.25■■■□□ 2.11
TOP2AP11388 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC28.25■■■□□ 2.11
TOP2AP11388 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
TOP2AP11388 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 AC105020.1-201ENST00000435356 2205 ntBASIC28.24■■■□□ 2.11
TOP2AP11388 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC28.24■■■□□ 2.11
TOP2AP11388 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
TOP2AP11388 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 FTH1P14-201ENST00000482930 551 ntBASIC28.24■■■□□ 2.11
TOP2AP11388 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC28.24■■■□□ 2.11
TOP2AP11388 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
TOP2AP11388 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TOP2AP11388 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
TOP2AP11388 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC28.23■■■□□ 2.11
TOP2AP11388 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC28.23■■■□□ 2.11
TOP2AP11388 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC28.23■■■□□ 2.11
TOP2AP11388 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
TOP2AP11388 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC28.23■■■□□ 2.11
TOP2AP11388 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC28.23■■■□□ 2.11
TOP2AP11388 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC28.23■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms