Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40ALP0C0E4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AC092580.3-201ENST00000430932 139 ntBASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AC241585.1-201ENST00000433527 519 ntBASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 TERF1P3-201ENST00000505638 1227 ntBASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AC073592.8-201ENST00000624126 511 ntBASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AL139011.1-202ENST00000642063 584 ntBASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40ALP0C0E4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 FAM220BP-201ENST00000377689 816 ntBASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 AC002472.2-201ENST00000442739 958 ntBASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 AC003101.2-201ENST00000612557 442 ntBASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 SPTSSB-204ENST00000617024 1292 ntBASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB40ALP0C0E4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RAB40ALP0C0E4 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 AL035456.1-201ENST00000456064 1369 ntBASIC15.51■□□□□ 0.07
RAB40ALP0C0E4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms