Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.85■□□□□ 0.61
TPM2P07951 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
TPM2P07951 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM2P07951 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM2P07951 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM2P07951 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC18.85■□□□□ 0.61
TPM2P07951 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.85■□□□□ 0.61
TPM2P07951 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TPM2P07951 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TPM2P07951 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TPM2P07951 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TPM2P07951 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 AC007292.2-201ENST00000593524 1812 ntBASIC18.84■□□□□ 0.61
TPM2P07951 AC132938.5-201ENST00000624980 1813 ntBASIC18.84■□□□□ 0.61
TPM2P07951 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TPM2P07951 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 RCN1P1-201ENST00000400413 996 ntBASIC18.84■□□□□ 0.61
TPM2P07951 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.84■□□□□ 0.61
TPM2P07951 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM2P07951 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.84■□□□□ 0.61
TPM2P07951 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.84■□□□□ 0.61
TPM2P07951 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.84■□□□□ 0.61
TPM2P07951 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 AD001527.2-201ENST00000622994 785 ntBASIC18.84■□□□□ 0.61
TPM2P07951 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TPM2P07951 FRMD8P1-201ENST00000440433 1524 ntBASIC18.84■□□□□ 0.61
TPM2P07951 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
TPM2P07951 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TPM2P07951 TP73-AS1-210ENST00000637775 1455 ntBASIC18.84■□□□□ 0.61
TPM2P07951 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC18.84■□□□□ 0.61
TPM2P07951 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TPM2P07951 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM2P07951 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TPM2P07951 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM2P07951 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
TPM2P07951 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.83■□□□□ 0.61
TPM2P07951 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM2P07951 KRT18P1-202ENST00000452408 1331 ntBASIC18.83■□□□□ 0.61
TPM2P07951 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TPM2P07951 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
TPM2P07951 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.83■□□□□ 0.6
TPM2P07951 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.83■□□□□ 0.6
TPM2P07951 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.83■□□□□ 0.6
TPM2P07951 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.83■□□□□ 0.6
TPM2P07951 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.83■□□□□ 0.6
TPM2P07951 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.83■□□□□ 0.6
TPM2P07951 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.83■□□□□ 0.6
TPM2P07951 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.83■□□□□ 0.6
TPM2P07951 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TPM2P07951 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.83■□□□□ 0.6
TPM2P07951 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TPM2P07951 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TPM2P07951 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.82■□□□□ 0.6
TPM2P07951 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms