Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTSDP07339 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CTSDP07339 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CTSDP07339 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 TLE1-202ENST00000376484 666 ntTSL 3 BASIC13.74□□□□□ -0.21
CTSDP07339 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 AC096582.2-201ENST00000510860 516 ntBASIC13.74□□□□□ -0.21
CTSDP07339 AC010331.1-201ENST00000611423 582 ntBASIC13.74□□□□□ -0.21
CTSDP07339 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 AC023157.3-201ENST00000619086 2088 ntBASIC13.74□□□□□ -0.21
CTSDP07339 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.74□□□□□ -0.21
CTSDP07339 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.74□□□□□ -0.21
CTSDP07339 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTSDP07339 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.74□□□□□ -0.21
CTSDP07339 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 TNRC18P2-201ENST00000417666 2714 ntBASIC13.73□□□□□ -0.21
CTSDP07339 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
CTSDP07339 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.73□□□□□ -0.21
CTSDP07339 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 RCN1P2-201ENST00000398357 915 ntBASIC13.73□□□□□ -0.21
CTSDP07339 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 CHCHD2P8-201ENST00000429873 447 ntBASIC13.73□□□□□ -0.21
CTSDP07339 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.73□□□□□ -0.21
CTSDP07339 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 MINOS1P3-201ENST00000457048 203 ntBASIC13.73□□□□□ -0.21
CTSDP07339 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.73□□□□□ -0.21
CTSDP07339 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.73□□□□□ -0.21
CTSDP07339 AC091167.2-201ENST00000579581 588 ntBASIC13.73□□□□□ -0.21
CTSDP07339 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CTSDP07339 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CTSDP07339 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTSDP07339 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.73□□□□□ -0.21
CTSDP07339 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms