Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC21.31■■□□□ 1
COL5A2P05997 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC21.31■■□□□ 1
COL5A2P05997 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.31■■□□□ 1
COL5A2P05997 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 AL355864.2-201ENST00000447420 863 ntBASIC21.31■■□□□ 1
COL5A2P05997 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.31■■□□□ 1
COL5A2P05997 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC21.31■■□□□ 1
COL5A2P05997 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC21.31■■□□□ 1
COL5A2P05997 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC21.31■■□□□ 1
COL5A2P05997 AC120045.2-201ENST00000567334 178 ntBASIC21.31■■□□□ 1
COL5A2P05997 CLUHP6-201ENST00000580789 941 ntBASIC21.31■■□□□ 1
COL5A2P05997 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
COL5A2P05997 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.31■■□□□ 1
COL5A2P05997 AC244669.2-201ENST00000612320 853 ntBASIC21.31■■□□□ 1
COL5A2P05997 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
COL5A2P05997 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.31■■□□□ 1
COL5A2P05997 AC005622.1-201ENST00000636801 1703 ntBASIC21.31■■□□□ 1
COL5A2P05997 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.31■■□□□ 1
COL5A2P05997 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.31■■□□□ 1
COL5A2P05997 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC21.31■■□□□ 1
COL5A2P05997 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
COL5A2P05997 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC21.31■■□□□ 1
COL5A2P05997 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
COL5A2P05997 GGT3P-204ENST00000453783 1664 ntBASIC21.31■■□□□ 1
COL5A2P05997 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
COL5A2P05997 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
COL5A2P05997 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC21.3■■□□□ 1
COL5A2P05997 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.3■■□□□ 1
COL5A2P05997 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL5A2P05997 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC21.3■■□□□ 1
COL5A2P05997 GPAA1P2-201ENST00000417923 928 ntBASIC21.3■■□□□ 1
COL5A2P05997 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC21.3■■□□□ 1
COL5A2P05997 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC21.3■■□□□ 1
COL5A2P05997 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.3■■□□□ 1
COL5A2P05997 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC21.3■■□□□ 1
COL5A2P05997 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.3■■□□□ 1
COL5A2P05997 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC21.3■■□□□ 1
COL5A2P05997 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
COL5A2P05997 AC060834.1-201ENST00000443027 2032 ntBASIC21.3■■□□□ 1
COL5A2P05997 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
COL5A2P05997 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL5A2P05997 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.3■■□□□ 1
COL5A2P05997 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
COL5A2P05997 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
COL5A2P05997 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 KRT8P37-201ENST00000451609 1420 ntBASIC21.29■■□□□ 1
COL5A2P05997 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
COL5A2P05997 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 KRT18P64-201ENST00000434946 1219 ntBASIC21.29■■□□□ 1
COL5A2P05997 AC012441.1-201ENST00000446669 685 ntBASIC21.29■■□□□ 1
COL5A2P05997 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 ENPP7P5-201ENST00000541031 1031 ntBASIC21.29■■□□□ 1
COL5A2P05997 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC21.29■■□□□ 1
COL5A2P05997 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC21.29■■□□□ 1
COL5A2P05997 MIR3615-201ENST00000581999 87 ntBASIC21.29■■□□□ 1
COL5A2P05997 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC21.29■■□□□ 1
COL5A2P05997 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC21.29■■□□□ 1
COL5A2P05997 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC21.29■■□□□ 1
COL5A2P05997 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
COL5A2P05997 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
COL5A2P05997 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 YBX1P6-201ENST00000442962 1002 ntBASIC21.28■■□□□ 1
COL5A2P05997 AC245100.5-201ENST00000452108 331 ntBASIC21.28■■□□□ 1
COL5A2P05997 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC21.28■■□□□ 1
COL5A2P05997 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC21.28■■□□□ 1
COL5A2P05997 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 DUX4L45-201ENST00000566406 1057 ntBASIC21.28■■□□□ 1
COL5A2P05997 AC005252.2-201ENST00000624630 1141 ntBASIC21.28■■□□□ 1
COL5A2P05997 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.28■■□□□ 1
COL5A2P05997 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
COL5A2P05997 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms