Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 PCDHB19P-201ENST00000570871 2371 ntBASIC13.01□□□□□ -0.33
TRGV3P03979 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV3P03979 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 AC140658.5-201ENST00000438532 169 ntBASIC13.01□□□□□ -0.33
TRGV3P03979 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV3P03979 AC112191.1-201ENST00000523689 701 ntBASIC13.01□□□□□ -0.33
TRGV3P03979 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV3P03979 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.01□□□□□ -0.33
TRGV3P03979 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV3P03979 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV3P03979 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.01□□□□□ -0.33
TRGV3P03979 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 MTDHP5-201ENST00000598980 586 ntBASIC13.01□□□□□ -0.33
TRGV3P03979 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
TRGV3P03979 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
TRGV3P03979 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.01□□□□□ -0.33
TRGV3P03979 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
TRGV3P03979 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.01□□□□□ -0.33
TRGV3P03979 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
TRGV3P03979 AC126755.1-201ENST00000525846 6405 ntBASIC13□□□□□ -0.33
TRGV3P03979 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
TRGV3P03979 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13□□□□□ -0.33
TRGV3P03979 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13□□□□□ -0.33
TRGV3P03979 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 SNX33P1-201ENST00000592116 1762 ntBASIC13□□□□□ -0.33
TRGV3P03979 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
TRGV3P03979 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13□□□□□ -0.33
TRGV3P03979 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13□□□□□ -0.33
TRGV3P03979 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 AC002056.1-201ENST00000395613 760 ntBASIC13□□□□□ -0.33
TRGV3P03979 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13□□□□□ -0.33
TRGV3P03979 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 AC004832.2-201ENST00000426397 482 ntBASIC13□□□□□ -0.33
TRGV3P03979 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 DNAJB3-201ENST00000446806 729 ntBASIC13□□□□□ -0.33
TRGV3P03979 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13□□□□□ -0.33
TRGV3P03979 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 MIR3909-201ENST00000579518 119 ntBASIC13□□□□□ -0.33
TRGV3P03979 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13□□□□□ -0.33
TRGV3P03979 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC13□□□□□ -0.33
TRGV3P03979 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
TRGV3P03979 AL009183.1-201ENST00000603760 355 ntBASIC13□□□□□ -0.33
TRGV3P03979 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
TRGV3P03979 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms