Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MBD3O95983 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MBD3O95983 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD3O95983 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MBD3O95983 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
MBD3O95983 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
MBD3O95983 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD3O95983 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD3O95983 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.94■□□□□ 0.62
MBD3O95983 CHCHD2P8-201ENST00000429873 447 ntBASIC18.94■□□□□ 0.62
MBD3O95983 MINOS1P3-201ENST00000457048 203 ntBASIC18.94■□□□□ 0.62
MBD3O95983 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.94■□□□□ 0.62
MBD3O95983 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 AC012306.2-201ENST00000609350 630 ntBASIC18.94■□□□□ 0.62
MBD3O95983 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
MBD3O95983 AC020765.3-201ENST00000613051 740 ntBASIC18.94■□□□□ 0.62
MBD3O95983 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD3O95983 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.94■□□□□ 0.62
MBD3O95983 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
MBD3O95983 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.94■□□□□ 0.62
MBD3O95983 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
MBD3O95983 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 AC005521.1-201ENST00000393351 872 ntBASIC18.93■□□□□ 0.62
MBD3O95983 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 PAWRP1-201ENST00000451083 565 ntBASIC18.93■□□□□ 0.62
MBD3O95983 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
MBD3O95983 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.93■□□□□ 0.62
MBD3O95983 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
MBD3O95983 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 AL592424.1-201ENST00000563624 1536 ntBASIC18.93■□□□□ 0.62
MBD3O95983 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.93■□□□□ 0.62
MBD3O95983 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
MBD3O95983 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.93■□□□□ 0.62
MBD3O95983 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.93■□□□□ 0.62
MBD3O95983 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.93■□□□□ 0.62
MBD3O95983 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.93■□□□□ 0.62
MBD3O95983 AC233702.3-201ENST00000578656 1387 ntBASIC18.93■□□□□ 0.62
MBD3O95983 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
MBD3O95983 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.92■□□□□ 0.62
MBD3O95983 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
MBD3O95983 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms