Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.22■□□□□ 0.19
CPNE6O95741 AL136317.3-201ENST00000618497 906 ntBASIC16.22■□□□□ 0.19
CPNE6O95741 Z92544.3-201ENST00000624747 417 ntBASIC16.22■□□□□ 0.19
CPNE6O95741 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE6O95741 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.22■□□□□ 0.19
CPNE6O95741 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CPNE6O95741 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.22■□□□□ 0.19
CPNE6O95741 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPNE6O95741 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE6O95741 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPNE6O95741 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE6O95741 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE6O95741 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CPNE6O95741 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CPNE6O95741 AL513523.2-202ENST00000427283 2040 ntBASIC16.21■□□□□ 0.19
CPNE6O95741 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE6O95741 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.21■□□□□ 0.19
CPNE6O95741 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CPNE6O95741 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE6O95741 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 SPCS2P4-201ENST00000436160 681 ntBASIC16.21■□□□□ 0.19
CPNE6O95741 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CPNE6O95741 AC087641.1-201ENST00000557561 1021 ntBASIC16.21■□□□□ 0.19
CPNE6O95741 KRT8P23-201ENST00000560090 1207 ntBASIC16.21■□□□□ 0.19
CPNE6O95741 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.21■□□□□ 0.19
CPNE6O95741 AL096865.1-201ENST00000606796 927 ntBASIC16.21■□□□□ 0.19
CPNE6O95741 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE6O95741 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE6O95741 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE6O95741 AC092068.3-201ENST00000587894 2016 ntBASIC16.21■□□□□ 0.18
CPNE6O95741 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CPNE6O95741 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE6O95741 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE6O95741 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CPNE6O95741 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CPNE6O95741 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 WASH6P-202ENST00000359512 1437 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 AC092850.2-201ENST00000623821 2697 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 RNU1-129P-201ENST00000384064 167 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE6O95741 PMS2P4-201ENST00000412466 1052 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 AL512356.2-201ENST00000546955 174 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE6O95741 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.2■□□□□ 0.18
CPNE6O95741 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 MIR3909-201ENST00000579518 119 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 U1.21-201ENST00000580816 167 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 AP001059.3-201ENST00000619053 235 ntBASIC16.2■□□□□ 0.18
CPNE6O95741 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CPNE6O95741 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CPNE6O95741 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.2■□□□□ 0.18
CPNE6O95741 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CPNE6O95741 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms