Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
CSPG5O95196 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CSPG5O95196 CETN4P-206ENST00000642099 2168 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 FOXO1B-201ENST00000504678 1527 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CSPG5O95196 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
CSPG5O95196 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.69■□□□□ 0.42
CSPG5O95196 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
CSPG5O95196 RPL37AP1-201ENST00000412502 279 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG5O95196 AC135586.1-201ENST00000539323 574 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG5O95196 AC140912.1-201ENST00000577171 1054 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG5O95196 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG5O95196 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.69■□□□□ 0.42
CSPG5O95196 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CSPG5O95196 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.69■□□□□ 0.42
CSPG5O95196 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.69■□□□□ 0.42
CSPG5O95196 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CSPG5O95196 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CSPG5O95196 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CSPG5O95196 HLA-H-201ENST00000383620 1096 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 DGCR5-201ENST00000399539 862 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CSPG5O95196 HLA-V-204ENST00000476601 1289 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.68■□□□□ 0.42
CSPG5O95196 RNA5SP410-201ENST00000516285 106 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CSPG5O95196 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 TP53TG3HP-202ENST00000569755 579 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 AC132938.2-201ENST00000579188 680 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.68■□□□□ 0.42
CSPG5O95196 IGHV3-72-202ENST00000621503 303 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 AL591163.1-201ENST00000641757 987 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 LINC00895-201ENST00000629028 1637 ntBASIC17.68■□□□□ 0.42
CSPG5O95196 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.68■□□□□ 0.42
CSPG5O95196 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CSPG5O95196 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CSPG5O95196 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms