Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.35■□□□□ 0.05
PRKNO60260 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PRKNO60260 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.35■□□□□ 0.05
PRKNO60260 AC005237.2-201ENST00000434368 219 ntBASIC15.35■□□□□ 0.05
PRKNO60260 AC023141.5-201ENST00000458585 616 ntBASIC15.35■□□□□ 0.05
PRKNO60260 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.35■□□□□ 0.05
PRKNO60260 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.35■□□□□ 0.05
PRKNO60260 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.35■□□□□ 0.05
PRKNO60260 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PRKNO60260 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PRKNO60260 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PRKNO60260 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PRKNO60260 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.35■□□□□ 0.05
PRKNO60260 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.35■□□□□ 0.05
PRKNO60260 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRKNO60260 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRKNO60260 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRKNO60260 GPAA1P2-202ENST00000606848 1787 ntBASIC15.34■□□□□ 0.05
PRKNO60260 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.34■□□□□ 0.05
PRKNO60260 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 AC027307.2-201ENST00000591252 911 ntBASIC15.34■□□□□ 0.05
PRKNO60260 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.34■□□□□ 0.05
PRKNO60260 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRKNO60260 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.34■□□□□ 0.05
PRKNO60260 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRKNO60260 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRKNO60260 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PRKNO60260 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.33■□□□□ 0.05
PRKNO60260 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRKNO60260 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PRKNO60260 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PRKNO60260 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.33■□□□□ 0.05
PRKNO60260 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.33■□□□□ 0.05
PRKNO60260 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.33■□□□□ 0.04
PRKNO60260 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.33■□□□□ 0.04
PRKNO60260 TSEN15P1-201ENST00000423257 515 ntBASIC15.33■□□□□ 0.04
PRKNO60260 PMS2P2-201ENST00000425039 1128 ntBASIC15.33■□□□□ 0.04
PRKNO60260 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 KRT18P34-201ENST00000488218 1270 ntBASIC15.33■□□□□ 0.04
PRKNO60260 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.33■□□□□ 0.04
PRKNO60260 AC109322.1-201ENST00000524499 1264 ntBASIC15.33■□□□□ 0.04
PRKNO60260 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.33■□□□□ 0.04
PRKNO60260 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.33■□□□□ 0.04
PRKNO60260 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PRKNO60260 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.33■□□□□ 0.04
PRKNO60260 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms