Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HOXA2O43364 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXA2O43364 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXA2O43364 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
HOXA2O43364 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXA2O43364 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
HOXA2O43364 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
HOXA2O43364 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
HOXA2O43364 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.52■□□□□ 0.39
HOXA2O43364 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
HOXA2O43364 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 AC007613.1-201ENST00000572811 2597 ntBASIC17.51■□□□□ 0.39
HOXA2O43364 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
HOXA2O43364 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 DGCR5-201ENST00000399539 862 ntBASIC17.51■□□□□ 0.39
HOXA2O43364 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 TPRX2P-201ENST00000535362 881 ntBASIC17.51■□□□□ 0.39
HOXA2O43364 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HOXA2O43364 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
HOXA2O43364 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.51■□□□□ 0.39
HOXA2O43364 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
HOXA2O43364 AC099568.2-201ENST00000609194 695 ntBASIC17.51■□□□□ 0.39
HOXA2O43364 MIR6752-201ENST00000618442 71 ntBASIC17.51■□□□□ 0.39
HOXA2O43364 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HOXA2O43364 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HOXA2O43364 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
HOXA2O43364 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA2O43364 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HOXA2O43364 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA2O43364 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
HOXA2O43364 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
HOXA2O43364 FO393414.2-201ENST00000405153 598 ntBASIC17.5■□□□□ 0.39
HOXA2O43364 GIMAP3P-201ENST00000495150 836 ntBASIC17.5■□□□□ 0.39
HOXA2O43364 MEIS3P1-201ENST00000495167 958 ntBASIC17.5■□□□□ 0.39
HOXA2O43364 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA2O43364 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA2O43364 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA2O43364 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXA2O43364 MIR4321-201ENST00000592276 80 ntBASIC17.5■□□□□ 0.39
HOXA2O43364 AC004461.2-201ENST00000629517 803 ntBASIC17.5■□□□□ 0.39
HOXA2O43364 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.5■□□□□ 0.39
HOXA2O43364 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HOXA2O43364 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.5■□□□□ 0.39
HOXA2O43364 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HOXA2O43364 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.5■□□□□ 0.39
HOXA2O43364 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
HOXA2O43364 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HOXA2O43364 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.49■□□□□ 0.39
HOXA2O43364 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HOXA2O43364 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms