Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
O00370 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
O00370 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
O00370 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
O00370 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
O00370 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.59■□□□□ 0.41
O00370 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
O00370 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
O00370 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.59■□□□□ 0.41
O00370 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
O00370 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 AC016027.1-202ENST00000607927 1699 ntBASIC17.59■□□□□ 0.41
O00370 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
O00370 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.59■□□□□ 0.41
O00370 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
O00370 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
O00370 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
O00370 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
O00370 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.59■□□□□ 0.41
O00370 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.59■□□□□ 0.41
O00370 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.59■□□□□ 0.41
O00370 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.59■□□□□ 0.41
O00370 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
O00370 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
O00370 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.59■□□□□ 0.41
O00370 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.59■□□□□ 0.41
O00370 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
O00370 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
O00370 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
O00370 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
O00370 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
O00370 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.58■□□□□ 0.41
O00370 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
O00370 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
O00370 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
O00370 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.58■□□□□ 0.41
O00370 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
O00370 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
O00370 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
O00370 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.58■□□□□ 0.41
O00370 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.58■□□□□ 0.41
O00370 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
O00370 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 ADH5P3-201ENST00000433842 1137 ntBASIC17.58■□□□□ 0.4
O00370 DNAJB3-201ENST00000446806 729 ntBASIC17.58■□□□□ 0.4
O00370 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.58■□□□□ 0.4
O00370 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.58■□□□□ 0.4
O00370 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.58■□□□□ 0.4
O00370 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.58■□□□□ 0.4
O00370 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.58■□□□□ 0.4
O00370 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.58■□□□□ 0.4
O00370 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.58■□□□□ 0.4
O00370 AL161645.1-201ENST00000622716 1255 ntBASIC17.58■□□□□ 0.4
O00370 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
O00370 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
O00370 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.58■□□□□ 0.4
O00370 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.58■□□□□ 0.4
O00370 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.58■□□□□ 0.4
O00370 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms