Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 AC064836.3-201ENST00000607928 673 ntBASIC17.15■□□□□ 0.34
SRRM3A6NNA2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 KRT89P-201ENST00000620027 1478 ntBASIC17.15■□□□□ 0.34
SRRM3A6NNA2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SRRM3A6NNA2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 CROCCP1-201ENST00000426910 5675 ntBASIC17.14■□□□□ 0.33
SRRM3A6NNA2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AP005117.1-202ENST00000581724 1908 ntBASIC17.14■□□□□ 0.33
SRRM3A6NNA2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AC073347.1-201ENST00000421633 2643 ntBASIC17.14■□□□□ 0.33
SRRM3A6NNA2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 MYCLP1-201ENST00000372451 1075 ntBASIC17.14■□□□□ 0.33
SRRM3A6NNA2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AC093028.1-201ENST00000622998 982 ntBASIC17.14■□□□□ 0.33
SRRM3A6NNA2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRRM3A6NNA2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 AC007274.1-201ENST00000439805 662 ntBASIC17.13■□□□□ 0.33
SRRM3A6NNA2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 MIR4745-201ENST00000577608 62 ntBASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TUBB8P12-201ENST00000308911 1335 ntBASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TUBB7P-202ENST00000428444 1305 ntBASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TUBB8P7-204ENST00000567960 1332 ntBASIC17.13■□□□□ 0.33
SRRM3A6NNA2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM3A6NNA2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms