Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL732292.2-201ENST00000609649 430 ntBASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL355877.3-201ENST00000622820 899 ntBASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 AL009178.2-201ENST00000597278 2719 ntBASIC13.84□□□□□ -0.19
TRBV6-7A0A0A0MS04 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRBV6-7A0A0A0MS04 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 PTCHD3P3-201ENST00000403073 906 ntBASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 MTDHP4-201ENST00000600287 670 ntBASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 PI4KAP1-204ENST00000612579 1703 ntBASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRBV6-7A0A0A0MS04 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LINC01144-201ENST00000626198 1710 ntBASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 GPAA1P2-202ENST00000606848 1787 ntBASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRBV6-7A0A0A0MS04 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms