Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 PMS2P1-201ENST00000431037 1228 ntBASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 WDR53-204ENST00000433160 887 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AC107918.2-201ENST00000530817 355 ntBASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AL049840.3-201ENST00000602669 611 ntBASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AC010654.1-201ENST00000615722 808 ntBASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 ALOX12P2-203ENST00000570921 1945 ntBASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
TRGV1A0A0A0MS02 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 PCDHA3-202ENST00000532566 4594 ntBASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
TRGV1A0A0A0MS02 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 AL671710.1-201ENST00000610245 2349 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 HCG4-201ENST00000418983 998 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 AC098831.1-202ENST00000438821 336 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 PPIE-208ENST00000470213 927 ntTSL 3 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CYP2A7P1-201ENST00000595391 815 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 MIR7706-201ENST00000613747 67 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 PCDH8P1-201ENST00000428983 2773 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 AC092364.2-201ENST00000596710 2692 ntBASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC12.02□□□□□ -0.49
TRGV1A0A0A0MS02 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
TRGV1A0A0A0MS02 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms