Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 AC105917.1-201ENST00000506637 2539 ntBASIC18.85■□□□□ 0.61
CLIC4Q9Y696 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.85■□□□□ 0.61
CLIC4Q9Y696 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLIC4Q9Y696 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.83■□□□□ 0.61
CLIC4Q9Y696 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 AL645728.2-201ENST00000641974 660 ntBASIC18.83■□□□□ 0.6
CLIC4Q9Y696 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLIC4Q9Y696 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms