Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 AL645728.1-201ENST00000366221 2101 ntBASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 RRP7BP-205ENST00000566851 833 ntBASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.1■□□□□ 0.33
HCFC2Q9Y5Z7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 AP005482.1-201ENST00000563722 1273 ntBASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 TMEM261P1-201ENST00000604899 340 ntBASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 AC074044.1-201ENST00000609673 707 ntBASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 AL031731.1-201ENST00000642131 2094 ntBASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HCFC2Q9Y5Z7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HCFC2Q9Y5Z7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 KRT223P-202ENST00000449164 1292 ntBASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 AP002490.2-201ENST00000524791 560 ntBASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 AC008735.3-201ENST00000596646 500 ntBASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 MIR6775-201ENST00000617557 69 ntBASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 COX11-210ENST00000639671 696 ntBASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
HCFC2Q9Y5Z7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms