Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 TSEN15P1-201ENST00000423257 515 ntBASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 ALOX12P2-203ENST00000570921 1945 ntBASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
COL4A3BPQ9Y5P4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AL627223.1-201ENST00000416693 442 ntBASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AL592309.1-201ENST00000443127 649 ntBASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AC023141.5-201ENST00000458585 616 ntBASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AC093520.2-201ENST00000561830 333 ntBASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 GPAA1P2-202ENST00000606848 1787 ntBASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 AL662844.4-201ENST00000606367 2838 ntBASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
COL4A3BPQ9Y5P4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 DOC2GP-204ENST00000639052 2548 ntBASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AL139400.1-201ENST00000366220 510 ntBASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.43■□□□□ 0.54
COL4A3BPQ9Y5P4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms