Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC067863.1-201ENST00000494933 530 ntBASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC093520.2-201ENST00000561830 333 ntBASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC093512.1-201ENST00000617969 520 ntBASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHGA6Q9Y5G7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 CYP2T1P-202ENST00000641596 2535 ntBASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 FAM86GP-201ENST00000448322 971 ntBASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 KRT8P48-201ENST00000515599 1220 ntBASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 AL161645.1-201ENST00000622716 1255 ntBASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCDHGA6Q9Y5G7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA6Q9Y5G7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PCDHGA6Q9Y5G7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms