Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 TUBB8P12-201ENST00000308911 1335 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 TUBB7P-202ENST00000428444 1305 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 TUBB8P7-204ENST00000567960 1332 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC069152.1-201ENST00000438030 544 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC112698.1-201ENST00000510299 916 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AF186192.3-201ENST00000583427 947 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 GXYLT1P5-201ENST00000614548 1189 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AL138709.1-201ENST00000614840 1693 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 AL118505.1-201ENST00000619370 1932 ntBASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CHTOPQ9Y3Y2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 FRMD8P1-201ENST00000440433 1524 ntBASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 PPP1R14BP3-201ENST00000509033 445 ntBASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.93□□□□□ -0.5
CHTOPQ9Y3Y2 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms