Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9Y3F1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9Y3F1 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Q9Y3F1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Q9Y3F1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Q9Y3F1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Q9Y3F1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.04■□□□□ 0.48
Q9Y3F1 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Q9Y3F1 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.04■□□□□ 0.48
Q9Y3F1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.04■□□□□ 0.48
Q9Y3F1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.04■□□□□ 0.48
Q9Y3F1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.04■□□□□ 0.48
Q9Y3F1 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.04■□□□□ 0.48
Q9Y3F1 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.04■□□□□ 0.48
Q9Y3F1 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
Q9Y3F1 AC004987.2-201ENST00000395959 1148 ntBASIC18.04■□□□□ 0.48
Q9Y3F1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.04■□□□□ 0.48
Q9Y3F1 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.04■□□□□ 0.48
Q9Y3F1 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.04■□□□□ 0.48
Q9Y3F1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Q9Y3F1 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Q9Y3F1 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.04■□□□□ 0.48
Q9Y3F1 MIR8072-201ENST00000614241 80 ntBASIC18.04■□□□□ 0.48
Q9Y3F1 MIR6799-201ENST00000620297 69 ntBASIC18.04■□□□□ 0.48
Q9Y3F1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.04■□□□□ 0.48
Q9Y3F1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC18.04■□□□□ 0.48
Q9Y3F1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Q9Y3F1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Q9Y3F1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Q9Y3F1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Q9Y3F1 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.03■□□□□ 0.48
Q9Y3F1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.03■□□□□ 0.48
Q9Y3F1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Q9Y3F1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Q9Y3F1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
Q9Y3F1 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.03■□□□□ 0.48
Q9Y3F1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.03■□□□□ 0.48
Q9Y3F1 EEF1DP4-201ENST00000446006 880 ntBASIC18.03■□□□□ 0.48
Q9Y3F1 AC245100.5-201ENST00000452108 331 ntBASIC18.03■□□□□ 0.48
Q9Y3F1 POU5F1P6-201ENST00000466990 990 ntBASIC18.03■□□□□ 0.48
Q9Y3F1 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.03■□□□□ 0.48
Q9Y3F1 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.03■□□□□ 0.48
Q9Y3F1 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.03■□□□□ 0.48
Q9Y3F1 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.03■□□□□ 0.48
Q9Y3F1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.03■□□□□ 0.48
Q9Y3F1 AL033527.5-201ENST00000641382 801 ntBASIC18.03■□□□□ 0.48
Q9Y3F1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.03■□□□□ 0.48
Q9Y3F1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.03■□□□□ 0.48
Q9Y3F1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
Q9Y3F1 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Q9Y3F1 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
Q9Y3F1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Q9Y3F1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Q9Y3F1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Q9Y3F1 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Q9Y3F1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.02■□□□□ 0.48
Q9Y3F1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Q9Y3F1 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Q9Y3F1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Q9Y3F1 MIR658-201ENST00000385210 100 ntBASIC18.02■□□□□ 0.48
Q9Y3F1 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Q9Y3F1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.02■□□□□ 0.48
Q9Y3F1 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.02■□□□□ 0.48
Q9Y3F1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.02■□□□□ 0.48
Q9Y3F1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.02■□□□□ 0.48
Q9Y3F1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.02■□□□□ 0.48
Q9Y3F1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.02■□□□□ 0.48
Q9Y3F1 AC092552.1-201ENST00000547243 906 ntBASIC18.02■□□□□ 0.48
Q9Y3F1 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.02■□□□□ 0.48
Q9Y3F1 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Q9Y3F1 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.02■□□□□ 0.48
Q9Y3F1 AC015936.2-201ENST00000593177 259 ntBASIC18.02■□□□□ 0.48
Q9Y3F1 AL691432.1-201ENST00000596308 1422 ntBASIC18.02■□□□□ 0.48
Q9Y3F1 AL512343.1-201ENST00000605837 169 ntBASIC18.02■□□□□ 0.48
Q9Y3F1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.02■□□□□ 0.48
Q9Y3F1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.02■□□□□ 0.48
Q9Y3F1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Q9Y3F1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Q9Y3F1 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms